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Research data . 2019
Additional file 5: of Epigenome-wide association study of serum cotinine in current smokers reveals novel genetically driven loci
Open Access
Authors:
Gupta, Richa; Dongen, Jenny; Fu, Yu; Abdellaoui, Abdel; Tyndale, Rachel; Velagapudi, Vidya; Dorret Boomsma; Korhonen, Tellervo; Kaprio, Jaakko; Loukola, Anu; +1 more
Gupta, Richa; Dongen, Jenny; Fu, Yu; Abdellaoui, Abdel; Tyndale, Rachel; Velagapudi, Vidya; Dorret Boomsma; Korhonen, Tellervo; Kaprio, Jaakko; Loukola, Anu; Ollikainen, Miina;
doi: 10.6084/m9.figshare.7551749 , 10.6084/m9.figshare.7551749.v1
doi: 10.6084/m9.figshare.7551749 , 10.6084/m9.figshare.7551749.v1
Publisher: figshare
Project: CIHR , AKA | Genomic epidemiology of a... (263278), AKA | CoE in Complex Disease Ge... (213506), EC | GMI (230374), AKA | Epigenetic pathways to ob... (297908), AKA | Genomic epidemiology of a... (265240), NWO | BBMRI-NL (2300154272), AKA | Center of Excellence in C... (129680)
Table S3. Cis acting methylation quantitative trait loci in the 40 genes highlighted in the EWAS. (XLS 31 kb)
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Average influence In bottom 99%
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Research data . 2019
Additional file 8: of Epigenome-wide association study of serum cotinine in current smokers reveals novel genetically driven loci
Open Access
Authors:
Gupta, Richa; Dongen, Jenny; Fu, Yu; Abdellaoui, Abdel; Tyndale, Rachel; Velagapudi, Vidya; Dorret Boomsma; Korhonen, Tellervo; Kaprio, Jaakko; Loukola, Anu; +1 more
Gupta, Richa; Dongen, Jenny; Fu, Yu; Abdellaoui, Abdel; Tyndale, Rachel; Velagapudi, Vidya; Dorret Boomsma; Korhonen, Tellervo; Kaprio, Jaakko; Loukola, Anu; Ollikainen, Miina;
doi: 10.6084/m9.figshare.7551761 , 10.6084/m9.figshare.7551761.v1
doi: 10.6084/m9.figshare.7551761 , 10.6084/m9.figshare.7551761.v1
Publisher: figshare
Project: CIHR , AKA | Genomic epidemiology of a... (263278), NWO | BBMRI-NL (2300154272), AKA | CoE in Complex Disease Ge... (213506), EC | GMI (230374), AKA | Epigenetic pathways to ob... (297908), AKA | Center of Excellence in C... (129680), AKA | Genomic epidemiology of a... (265240)
Table S5. Mediation analysis omnibus P values for the 19 meQTLs associated with serum cotinine levels. (XLS 33 kb)
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Average popularity In bottom 99%
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Average influence In bottom 99%
Influence: Citation-based measure reflecting the total impact.
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Please grant OpenAIRE to access and update your ORCID works.
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Research data . 2019
Additional file 10: of Epigenome-wide association study of serum cotinine in current smokers reveals novel genetically driven loci
Open Access
Authors:
Gupta, Richa; Dongen, Jenny; Fu, Yu; Abdellaoui, Abdel; Tyndale, Rachel; Velagapudi, Vidya; Dorret Boomsma; Korhonen, Tellervo; Kaprio, Jaakko; Loukola, Anu; +1 more
Gupta, Richa; Dongen, Jenny; Fu, Yu; Abdellaoui, Abdel; Tyndale, Rachel; Velagapudi, Vidya; Dorret Boomsma; Korhonen, Tellervo; Kaprio, Jaakko; Loukola, Anu; Ollikainen, Miina;
doi: 10.6084/m9.figshare.7551686.v1 , 10.6084/m9.figshare.7551686
doi: 10.6084/m9.figshare.7551686.v1 , 10.6084/m9.figshare.7551686
Publisher: figshare
Project: AKA | Epigenetic pathways to ob... (297908), AKA | Genomic epidemiology of a... (263278), AKA | CoE in Complex Disease Ge... (213506), EC | GMI (230374), NWO | BBMRI-NL (2300154272), AKA | Center of Excellence in C... (129680), CIHR , AKA | Genomic epidemiology of a... (265240)
Table S7. CpG sites showing significant (FDR pâ
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Average popularity In bottom 99%
Popularity: Citation-based measure reflecting the current impact.
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Average influence
Average influence In bottom 99%
Influence: Citation-based measure reflecting the total impact.
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addAdd to ORCID
Please grant OpenAIRE to access and update your ORCID works.
This Research product is the result of merged Research products in OpenAIRE.

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Research data . 2019
Additional file 12: of Epigenome-wide association study of serum cotinine in current smokers reveals novel genetically driven loci
Open Access
Authors:
Gupta, Richa; Dongen, Jenny; Fu, Yu; Abdellaoui, Abdel; Tyndale, Rachel; Velagapudi, Vidya; Dorret Boomsma; Korhonen, Tellervo; Kaprio, Jaakko; Loukola, Anu; +1 more
Gupta, Richa; Dongen, Jenny; Fu, Yu; Abdellaoui, Abdel; Tyndale, Rachel; Velagapudi, Vidya; Dorret Boomsma; Korhonen, Tellervo; Kaprio, Jaakko; Loukola, Anu; Ollikainen, Miina;
doi: 10.6084/m9.figshare.7551698.v1 , 10.6084/m9.figshare.7551698
doi: 10.6084/m9.figshare.7551698.v1 , 10.6084/m9.figshare.7551698
Publisher: figshare
Project: CIHR , AKA | Epigenetic pathways to ob... (297908), AKA | Genomic epidemiology of a... (263278), AKA | CoE in Complex Disease Ge... (213506), EC | GMI (230374), AKA | Genomic epidemiology of a... (265240), AKA | Center of Excellence in C... (129680), NWO | BBMRI-NL (2300154272)
Table S9. Literature search results for smoking EWAS. (XLS 9 kb)
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Average popularity In bottom 99%
Popularity: Citation-based measure reflecting the current impact.
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Average influence
Average influence In bottom 99%
Influence: Citation-based measure reflecting the total impact.
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addAdd to ORCID
Please grant OpenAIRE to access and update your ORCID works.
This Research product is the result of merged Research products in OpenAIRE.

You have already added works in your ORCID record related to the merged Research product.
Research data . 2019
Additional file 9: of Epigenome-wide association study of serum cotinine in current smokers reveals novel genetically driven loci
Open Access
Authors:
Gupta, Richa; Dongen, Jenny; Fu, Yu; Abdellaoui, Abdel; Tyndale, Rachel; Velagapudi, Vidya; Dorret Boomsma; Korhonen, Tellervo; Kaprio, Jaakko; Loukola, Anu; +1 more
Gupta, Richa; Dongen, Jenny; Fu, Yu; Abdellaoui, Abdel; Tyndale, Rachel; Velagapudi, Vidya; Dorret Boomsma; Korhonen, Tellervo; Kaprio, Jaakko; Loukola, Anu; Ollikainen, Miina;
doi: 10.6084/m9.figshare.7551767.v1 , 10.6084/m9.figshare.7551767
doi: 10.6084/m9.figshare.7551767.v1 , 10.6084/m9.figshare.7551767
Publisher: figshare
Project: AKA | CoE in Complex Disease Ge... (213506), EC | GMI (230374), AKA | Genomic epidemiology of a... (263278), NWO | BBMRI-NL (2300154272), AKA | Epigenetic pathways to ob... (297908), AKA | Center of Excellence in C... (129680), AKA | Genomic epidemiology of a... (265240), CIHR
Table S6. Transcription factor binding site information for 55 highlighted CpG sites based on ENCODE data. (XLS 96 kb)
Average popularity
Average popularity In bottom 99%
Popularity: Citation-based measure reflecting the current impact.
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Average influence
Average influence In bottom 99%
Influence: Citation-based measure reflecting the total impact.
View more details
addAdd to ORCID
Please grant OpenAIRE to access and update your ORCID works.
This Research product is the result of merged Research products in OpenAIRE.

You have already added works in your ORCID record related to the merged Research product.
Research data . 2019
Additional file 3: of Epigenome-wide association study of serum cotinine in current smokers reveals novel genetically driven loci
Open Access
Authors:
Gupta, Richa; Dongen, Jenny; Fu, Yu; Abdellaoui, Abdel; Tyndale, Rachel; Velagapudi, Vidya; Dorret Boomsma; Korhonen, Tellervo; Kaprio, Jaakko; Loukola, Anu; +1 more
Gupta, Richa; Dongen, Jenny; Fu, Yu; Abdellaoui, Abdel; Tyndale, Rachel; Velagapudi, Vidya; Dorret Boomsma; Korhonen, Tellervo; Kaprio, Jaakko; Loukola, Anu; Ollikainen, Miina;
doi: 10.6084/m9.figshare.7551734.v1 , 10.6084/m9.figshare.7551734
doi: 10.6084/m9.figshare.7551734.v1 , 10.6084/m9.figshare.7551734
Publisher: figshare
Project: AKA | Genomic epidemiology of a... (263278), AKA | Center of Excellence in C... (129680), CIHR , NWO | BBMRI-NL (2300154272), AKA | Epigenetic pathways to ob... (297908), AKA | Genomic epidemiology of a... (265240), AKA | CoE in Complex Disease Ge... (213506), EC | GMI (230374)
Table S2. SNPs in the 40 top genes significantly associated (FDR pâ
Average popularity
Average popularity In bottom 99%
Popularity: Citation-based measure reflecting the current impact.
View more details
Average influence
Average influence In bottom 99%
Influence: Citation-based measure reflecting the total impact.
View more details
addAdd to ORCID
Please grant OpenAIRE to access and update your ORCID works.
This Research product is the result of merged Research products in OpenAIRE.

You have already added works in your ORCID record related to the merged Research product.
Research data . 2019
Additional file 13: of Epigenome-wide association study of serum cotinine in current smokers reveals novel genetically driven loci
Open Access
Authors:
Gupta, Richa; Dongen, Jenny; Fu, Yu; Abdellaoui, Abdel; Tyndale, Rachel; Velagapudi, Vidya; Dorret Boomsma; Korhonen, Tellervo; Kaprio, Jaakko; Loukola, Anu; +1 more
Gupta, Richa; Dongen, Jenny; Fu, Yu; Abdellaoui, Abdel; Tyndale, Rachel; Velagapudi, Vidya; Dorret Boomsma; Korhonen, Tellervo; Kaprio, Jaakko; Loukola, Anu; Ollikainen, Miina;
doi: 10.6084/m9.figshare.7551707 , 10.6084/m9.figshare.7551707.v1
doi: 10.6084/m9.figshare.7551707 , 10.6084/m9.figshare.7551707.v1
Publisher: figshare
Project: AKA | Genomic epidemiology of a... (265240), CIHR , AKA | Genomic epidemiology of a... (263278), NWO | BBMRI-NL (2300154272), AKA | Epigenetic pathways to ob... (297908), AKA | Center of Excellence in C... (129680), AKA | CoE in Complex Disease Ge... (213506), EC | GMI (230374)
Table S10. Gene boundaries, based on Ensembl transcripts for the 40 genes highlighted in the EWAS. (XLS 10 kb)
Average popularity
Average popularity In bottom 99%
Popularity: Citation-based measure reflecting the current impact.
View more details
Average influence
Average influence In bottom 99%
Influence: Citation-based measure reflecting the total impact.
View more details
addAdd to ORCID
Please grant OpenAIRE to access and update your ORCID works.
This Research product is the result of merged Research products in OpenAIRE.

You have already added works in your ORCID record related to the merged Research product.
Research data . 2019
Additional file 2: of Epigenome-wide association study of serum cotinine in current smokers reveals novel genetically driven loci
Open Access
Authors:
Gupta, Richa; Dongen, Jenny; Fu, Yu; Abdellaoui, Abdel; Tyndale, Rachel; Velagapudi, Vidya; Dorret Boomsma; Korhonen, Tellervo; Kaprio, Jaakko; Loukola, Anu; +1 more
Gupta, Richa; Dongen, Jenny; Fu, Yu; Abdellaoui, Abdel; Tyndale, Rachel; Velagapudi, Vidya; Dorret Boomsma; Korhonen, Tellervo; Kaprio, Jaakko; Loukola, Anu; Ollikainen, Miina;
doi: 10.6084/m9.figshare.7551725 , 10.6084/m9.figshare.7551725.v1
doi: 10.6084/m9.figshare.7551725 , 10.6084/m9.figshare.7551725.v1
Publisher: figshare
Project: AKA | CoE in Complex Disease Ge... (213506), EC | GMI (230374), AKA | Center of Excellence in C... (129680), NWO | BBMRI-NL (2300154272), CIHR , AKA | Epigenetic pathways to ob... (297908), AKA | Genomic epidemiology of a... (263278), AKA | Genomic epidemiology of a... (265240)
Table S1. Gene network (IPA) and pathway analysis (Gene Ontology) of EWAS results. (XLS 3125 kb)
Average popularity
Average popularity In bottom 99%
Popularity: Citation-based measure reflecting the current impact.
View more details
Average influence
Average influence In bottom 99%
Influence: Citation-based measure reflecting the total impact.
View more details
addAdd to ORCID
Please grant OpenAIRE to access and update your ORCID works.
This Research product is the result of merged Research products in OpenAIRE.

You have already added works in your ORCID record related to the merged Research product.
Research data . 2019
Additional file 11: of Epigenome-wide association study of serum cotinine in current smokers reveals novel genetically driven loci
Open Access
Authors:
Gupta, Richa; Dongen, Jenny; Fu, Yu; Abdellaoui, Abdel; Tyndale, Rachel; Velagapudi, Vidya; Dorret Boomsma; Korhonen, Tellervo; Kaprio, Jaakko; Loukola, Anu; +1 more
Gupta, Richa; Dongen, Jenny; Fu, Yu; Abdellaoui, Abdel; Tyndale, Rachel; Velagapudi, Vidya; Dorret Boomsma; Korhonen, Tellervo; Kaprio, Jaakko; Loukola, Anu; Ollikainen, Miina;
doi: 10.6084/m9.figshare.7551692.v1 , 10.6084/m9.figshare.7551692
doi: 10.6084/m9.figshare.7551692.v1 , 10.6084/m9.figshare.7551692
Publisher: figshare
Project: CIHR , AKA | Center of Excellence in C... (129680), AKA | Genomic epidemiology of a... (263278), AKA | CoE in Complex Disease Ge... (213506), EC | GMI (230374), NWO | BBMRI-NL (2300154272), AKA | Epigenetic pathways to ob... (297908), AKA | Genomic epidemiology of a... (265240)
Table S8. Results for CIT performed on DILGOM sample replicated CpG sites and SNPs associated with their methylation levels as well as cotinine levels. (XLS 10 kb)
Average popularity
Average popularity In bottom 99%
Popularity: Citation-based measure reflecting the current impact.
View more details
Average influence
Average influence In bottom 99%
Influence: Citation-based measure reflecting the total impact.
View more details
addAdd to ORCID
Please grant OpenAIRE to access and update your ORCID works.
This Research product is the result of merged Research products in OpenAIRE.

You have already added works in your ORCID record related to the merged Research product.
Research data . 2019
Additional file 6: of Epigenome-wide association study of serum cotinine in current smokers reveals novel genetically driven loci
Open Access
Authors:
Gupta, Richa; Dongen, Jenny; Fu, Yu; Abdellaoui, Abdel; Tyndale, Rachel; Velagapudi, Vidya; Dorret Boomsma; Korhonen, Tellervo; Kaprio, Jaakko; Loukola, Anu; +1 more
Gupta, Richa; Dongen, Jenny; Fu, Yu; Abdellaoui, Abdel; Tyndale, Rachel; Velagapudi, Vidya; Dorret Boomsma; Korhonen, Tellervo; Kaprio, Jaakko; Loukola, Anu; Ollikainen, Miina;
doi: 10.6084/m9.figshare.7551755 , 10.6084/m9.figshare.7551755.v1
doi: 10.6084/m9.figshare.7551755 , 10.6084/m9.figshare.7551755.v1
Publisher: figshare
Project: AKA | Genomic epidemiology of a... (263278), CIHR , NWO | BBMRI-NL (2300154272), AKA | Epigenetic pathways to ob... (297908), AKA | CoE in Complex Disease Ge... (213506), EC | GMI (230374), AKA | Center of Excellence in C... (129680), AKA | Genomic epidemiology of a... (265240)
Table S4. Trans acting methylation quantitative trait loci in the 40 genes highlighted in the EWAS. (XLS 687 kb)
Average popularity
Average popularity In bottom 99%
Popularity: Citation-based measure reflecting the current impact.
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Average influence
Average influence In bottom 99%
Influence: Citation-based measure reflecting the total impact.
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addAdd to ORCID
Please grant OpenAIRE to access and update your ORCID works.
This Research product is the result of merged Research products in OpenAIRE.

You have already added works in your ORCID record related to the merged Research product.

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Additional file 5: of Epigenome-wide association study of serum cotinine in current smokers reveals novel genetically driven loci

Additional file 8: of Epigenome-wide association study of serum cotinine in current smokers reveals novel genetically driven loci

Additional file 10: of Epigenome-wide association study of serum cotinine in current smokers reveals novel genetically driven loci

Additional file 12: of Epigenome-wide association study of serum cotinine in current smokers reveals novel genetically driven loci

Additional file 9: of Epigenome-wide association study of serum cotinine in current smokers reveals novel genetically driven loci

Additional file 3: of Epigenome-wide association study of serum cotinine in current smokers reveals novel genetically driven loci

Additional file 13: of Epigenome-wide association study of serum cotinine in current smokers reveals novel genetically driven loci

Additional file 2: of Epigenome-wide association study of serum cotinine in current smokers reveals novel genetically driven loci

Additional file 11: of Epigenome-wide association study of serum cotinine in current smokers reveals novel genetically driven loci

Additional file 6: of Epigenome-wide association study of serum cotinine in current smokers reveals novel genetically driven loci

10 Research products, page 1 of 1

Additional file 5: of Epigenome-wide association study of serum cotinine in current smokers reveals novel genetically driven loci

Additional file 8: of Epigenome-wide association study of serum cotinine in current smokers reveals novel genetically driven loci

Additional file 10: of Epigenome-wide association study of serum cotinine in current smokers reveals novel genetically driven loci

Additional file 12: of Epigenome-wide association study of serum cotinine in current smokers reveals novel genetically driven loci

Additional file 9: of Epigenome-wide association study of serum cotinine in current smokers reveals novel genetically driven loci

Additional file 3: of Epigenome-wide association study of serum cotinine in current smokers reveals novel genetically driven loci

Additional file 13: of Epigenome-wide association study of serum cotinine in current smokers reveals novel genetically driven loci

Additional file 2: of Epigenome-wide association study of serum cotinine in current smokers reveals novel genetically driven loci

Additional file 11: of Epigenome-wide association study of serum cotinine in current smokers reveals novel genetically driven loci

Additional file 6: of Epigenome-wide association study of serum cotinine in current smokers reveals novel genetically driven loci

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