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Additional file 2 of The origins and genomic diversity of American Civil War Era smallpox vaccine strains
Research datakeyboard_double_arrow_right Dataset 2020figshare NSERC, CIHR, SSHRC +1 projects
NSERC ,
CIHR ,
SSHRC ,
WT
Authors: Duggan, Ana T.; Klunk, Jennifer; Porter, Ashleigh F.; Dhody, Anna N.; +18 Authors
Duggan, Ana T.; Klunk, Jennifer; Porter, Ashleigh F.; Dhody, Anna N.; Hicks, Robert; Smith, Geoffrey L.; Humphreys, Margaret; McCollum, Andrea M.; Whitni B. Davidson; Wilkins, Kimberly; Li, Yu; Burke, Amanda; Polasky, Hanna; Flanders, Lowell; Poinar, Debi; Amogelang R. Raphenya; Lau, Tammy T. Y.; Alcock, Brian; McArthur, Andrew G.; G. Brian Golding; Holmes, Edward C.; Poinar, Hendrik N.;
doi: 10.6084/m9.figshare.12673902 , 10.6084/m9.figshare.12673902.v1
doi: 10.6084/m9.figshare.12673902 , 10.6084/m9.figshare.12673902.v1
Additional file 2: Table S1. Details of the libraries generated from the Mütter Museum vaccination kits and vaccinia virus mapping statistics.
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Dataset . 2020
License: https://creativecommons.org/licenses/by/4.0/legalcode
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Dataset . 2020
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Additional file 2: of Social participation in older women and men: differences in community activities and barriers according to region and population size in Canada
Research datakeyboard_double_arrow_right Dataset 2019figshare SSHRC, CIHR
SSHRC ,
CIHR
Authors: Naud, Daniel; Généreux, Mélissa; Jean-François Bruneau; Alauzet, Aline; +1 Authors
Naud, Daniel; Généreux, Mélissa; Jean-François Bruneau; Alauzet, Aline; Levasseur, Mélanie;
doi: 10.6084/m9.figshare.9641324.v1 , 10.6084/m9.figshare.9641324
doi: 10.6084/m9.figshare.9641324.v1 , 10.6084/m9.figshare.9641324
Gender distribution by population size group. (XLSX 16 kb)
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Dataset . 2019
License: https://creativecommons.org/licenses/by/4.0/legalcode
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Dataset . 2019
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Additional file 1: of Social participation in older women and men: differences in community activities and barriers according to region and population size in Canada
Research datakeyboard_double_arrow_right Dataset 2019figshare SSHRC, CIHR
SSHRC ,
CIHR
Authors: Naud, Daniel; Généreux, Mélissa; Jean-François Bruneau; Alauzet, Aline; +1 Authors
Naud, Daniel; Généreux, Mélissa; Jean-François Bruneau; Alauzet, Aline; Levasseur, Mélanie;
doi: 10.6084/m9.figshare.9641315.v1 , 10.6084/m9.figshare.9641315
doi: 10.6084/m9.figshare.9641315.v1 , 10.6084/m9.figshare.9641315
Gender distribution by region. (XLSX 17 kb)
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Dataset . 2019
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Dataset . 2019
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Additional file 4 of The origins and genomic diversity of American Civil War Era smallpox vaccine strains
Research datakeyboard_double_arrow_right Dataset 2020figshare CIHR, NSERC, SSHRC +1 projects
CIHR ,
NSERC ,
SSHRC ,
WT
Authors: Duggan, Ana T.; Klunk, Jennifer; Porter, Ashleigh F.; Dhody, Anna N.; +18 Authors
Duggan, Ana T.; Klunk, Jennifer; Porter, Ashleigh F.; Dhody, Anna N.; Hicks, Robert; Smith, Geoffrey L.; Humphreys, Margaret; McCollum, Andrea M.; Whitni B. Davidson; Wilkins, Kimberly; Li, Yu; Burke, Amanda; Polasky, Hanna; Flanders, Lowell; Poinar, Debi; Amogelang R. Raphenya; Lau, Tammy T. Y.; Alcock, Brian; McArthur, Andrew G.; G. Brian Golding; Holmes, Edward C.; Poinar, Hendrik N.;
doi: 10.6084/m9.figshare.12673908.v1 , 10.6084/m9.figshare.12673908
doi: 10.6084/m9.figshare.12673908.v1 , 10.6084/m9.figshare.12673908
Additional file 4: Table S2. Mapping statistics for human component of libraries VK01, VK02 and VK08.
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Dataset . 2020
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Additional file 5 of The origins and genomic diversity of American Civil War Era smallpox vaccine strains
Research datakeyboard_double_arrow_right Dataset 2020figshare WT, SSHRC, NSERC +1 projects
WT ,
SSHRC ,
NSERC ,
CIHR
Authors: Duggan, Ana T.; Klunk, Jennifer; Porter, Ashleigh F.; Dhody, Anna N.; +18 Authors
Duggan, Ana T.; Klunk, Jennifer; Porter, Ashleigh F.; Dhody, Anna N.; Hicks, Robert; Smith, Geoffrey L.; Humphreys, Margaret; McCollum, Andrea M.; Whitni B. Davidson; Wilkins, Kimberly; Li, Yu; Burke, Amanda; Polasky, Hanna; Flanders, Lowell; Poinar, Debi; Amogelang R. Raphenya; Lau, Tammy T. Y.; Alcock, Brian; McArthur, Andrew G.; G. Brian Golding; Holmes, Edward C.; Poinar, Hendrik N.;
doi: 10.6084/m9.figshare.12673911.v1 , 10.6084/m9.figshare.12673911
doi: 10.6084/m9.figshare.12673911.v1 , 10.6084/m9.figshare.12673911
Additional file 5: Table S3. Summary statistics produced by QUAST for SPAdes de novo assemblies of VK01, VK02 and VK08 from shotgun data.
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Dataset . 2020
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Additional file 14 of The origins and genomic diversity of American Civil War Era smallpox vaccine strains
Research datakeyboard_double_arrow_right Dataset 2020figshare WT, SSHRC, NSERC +1 projects
WT ,
SSHRC ,
NSERC ,
CIHR
Authors: Duggan, Ana T.; Klunk, Jennifer; Porter, Ashleigh F.; Dhody, Anna N.; +18 Authors
Duggan, Ana T.; Klunk, Jennifer; Porter, Ashleigh F.; Dhody, Anna N.; Hicks, Robert; Smith, Geoffrey L.; Humphreys, Margaret; McCollum, Andrea M.; Whitni B. Davidson; Wilkins, Kimberly; Li, Yu; Burke, Amanda; Polasky, Hanna; Flanders, Lowell; Poinar, Debi; Amogelang R. Raphenya; Lau, Tammy T. Y.; Alcock, Brian; McArthur, Andrew G.; G. Brian Golding; Holmes, Edward C.; Poinar, Hendrik N.;
doi: 10.6084/m9.figshare.12673887.v1 , 10.6084/m9.figshare.12673887
doi: 10.6084/m9.figshare.12673887.v1 , 10.6084/m9.figshare.12673887
Additional file 14: Table S6. BLASTX, Bowtie2, and taxonomic k-mer annotation of VK02 reads against CARD reference sequences.
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Dataset . 2020
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Additional file 9 of The origins and genomic diversity of American Civil War Era smallpox vaccine strains
Research datakeyboard_double_arrow_right Dataset 2020figshare NSERC, CIHR, SSHRC +1 projects
NSERC ,
CIHR ,
SSHRC ,
WT
Authors: Duggan, Ana T.; Klunk, Jennifer; Porter, Ashleigh F.; Dhody, Anna N.; +18 Authors
Duggan, Ana T.; Klunk, Jennifer; Porter, Ashleigh F.; Dhody, Anna N.; Hicks, Robert; Smith, Geoffrey L.; Humphreys, Margaret; McCollum, Andrea M.; Whitni B. Davidson; Wilkins, Kimberly; Li, Yu; Burke, Amanda; Polasky, Hanna; Flanders, Lowell; Poinar, Debi; Amogelang R. Raphenya; Lau, Tammy T. Y.; Alcock, Brian; McArthur, Andrew G.; G. Brian Golding; Holmes, Edward C.; Poinar, Hendrik N.;
doi: 10.6084/m9.figshare.12673923 , 10.6084/m9.figshare.12673923.v1
doi: 10.6084/m9.figshare.12673923 , 10.6084/m9.figshare.12673923.v1
Additional file 9: Table S4. OPXV genomes used for comparison in the phylogenetic analyses.
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Additional file 12 of The origins and genomic diversity of American Civil War Era smallpox vaccine strains
Research datakeyboard_double_arrow_right Dataset 2020figshare WT, SSHRC, CIHR +1 projects
WT ,
SSHRC ,
CIHR ,
NSERC
Authors: Duggan, Ana T.; Klunk, Jennifer; Porter, Ashleigh F.; Dhody, Anna N.; +18 Authors
Duggan, Ana T.; Klunk, Jennifer; Porter, Ashleigh F.; Dhody, Anna N.; Hicks, Robert; Smith, Geoffrey L.; Humphreys, Margaret; McCollum, Andrea M.; Whitni B. Davidson; Wilkins, Kimberly; Li, Yu; Burke, Amanda; Polasky, Hanna; Flanders, Lowell; Poinar, Debi; Amogelang R. Raphenya; Lau, Tammy T. Y.; Alcock, Brian; McArthur, Andrew G.; G. Brian Golding; Holmes, Edward C.; Poinar, Hendrik N.;
doi: 10.6084/m9.figshare.12673881 , 10.6084/m9.figshare.12673881.v1
doi: 10.6084/m9.figshare.12673881 , 10.6084/m9.figshare.12673881.v1
Additional file 12: Table S5. OPXV genomes used for bait design.
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8 Research products

Additional file 2 of The origins and genomic diversity of American Civil War Era smallpox vaccine strains
Research datakeyboard_double_arrow_right Dataset 2020figshare NSERC, CIHR, SSHRC +1 projects
NSERC ,
CIHR ,
SSHRC ,
WT
Authors: Duggan, Ana T.; Klunk, Jennifer; Porter, Ashleigh F.; Dhody, Anna N.; +18 Authors
Duggan, Ana T.; Klunk, Jennifer; Porter, Ashleigh F.; Dhody, Anna N.; Hicks, Robert; Smith, Geoffrey L.; Humphreys, Margaret; McCollum, Andrea M.; Whitni B. Davidson; Wilkins, Kimberly; Li, Yu; Burke, Amanda; Polasky, Hanna; Flanders, Lowell; Poinar, Debi; Amogelang R. Raphenya; Lau, Tammy T. Y.; Alcock, Brian; McArthur, Andrew G.; G. Brian Golding; Holmes, Edward C.; Poinar, Hendrik N.;
doi: 10.6084/m9.figshare.12673902 , 10.6084/m9.figshare.12673902.v1
doi: 10.6084/m9.figshare.12673902 , 10.6084/m9.figshare.12673902.v1
Additional file 2: Table S1. Details of the libraries generated from the Mütter Museum vaccination kits and vaccinia virus mapping statistics.
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Dataset . 2020
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Dataset . 2020
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Additional file 2: of Social participation in older women and men: differences in community activities and barriers according to region and population size in Canada
Research datakeyboard_double_arrow_right Dataset 2019figshare SSHRC, CIHR
SSHRC ,
CIHR
Authors: Naud, Daniel; Généreux, Mélissa; Jean-François Bruneau; Alauzet, Aline; +1 Authors
Naud, Daniel; Généreux, Mélissa; Jean-François Bruneau; Alauzet, Aline; Levasseur, Mélanie;
doi: 10.6084/m9.figshare.9641324.v1 , 10.6084/m9.figshare.9641324
doi: 10.6084/m9.figshare.9641324.v1 , 10.6084/m9.figshare.9641324
Gender distribution by population size group. (XLSX 16 kb)
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Additional file 1: of Social participation in older women and men: differences in community activities and barriers according to region and population size in Canada
Research datakeyboard_double_arrow_right Dataset 2019figshare SSHRC, CIHR
SSHRC ,
CIHR
Authors: Naud, Daniel; Généreux, Mélissa; Jean-François Bruneau; Alauzet, Aline; +1 Authors
Naud, Daniel; Généreux, Mélissa; Jean-François Bruneau; Alauzet, Aline; Levasseur, Mélanie;
doi: 10.6084/m9.figshare.9641315.v1 , 10.6084/m9.figshare.9641315
doi: 10.6084/m9.figshare.9641315.v1 , 10.6084/m9.figshare.9641315
Gender distribution by region. (XLSX 17 kb)
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figshare
Dataset . 2019
License: https://creativecommons.org/licenses/by/4.0/legalcode
Data sources: Datacite
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Dataset . 2019
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Additional file 4 of The origins and genomic diversity of American Civil War Era smallpox vaccine strains
Research datakeyboard_double_arrow_right Dataset 2020figshare CIHR, NSERC, SSHRC +1 projects
CIHR ,
NSERC ,
SSHRC ,
WT
Authors: Duggan, Ana T.; Klunk, Jennifer; Porter, Ashleigh F.; Dhody, Anna N.; +18 Authors
Duggan, Ana T.; Klunk, Jennifer; Porter, Ashleigh F.; Dhody, Anna N.; Hicks, Robert; Smith, Geoffrey L.; Humphreys, Margaret; McCollum, Andrea M.; Whitni B. Davidson; Wilkins, Kimberly; Li, Yu; Burke, Amanda; Polasky, Hanna; Flanders, Lowell; Poinar, Debi; Amogelang R. Raphenya; Lau, Tammy T. Y.; Alcock, Brian; McArthur, Andrew G.; G. Brian Golding; Holmes, Edward C.; Poinar, Hendrik N.;
doi: 10.6084/m9.figshare.12673908.v1 , 10.6084/m9.figshare.12673908
doi: 10.6084/m9.figshare.12673908.v1 , 10.6084/m9.figshare.12673908
Additional file 4: Table S2. Mapping statistics for human component of libraries VK01, VK02 and VK08.
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Dataset . 2020
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Additional file 5 of The origins and genomic diversity of American Civil War Era smallpox vaccine strains
Research datakeyboard_double_arrow_right Dataset 2020figshare WT, SSHRC, NSERC +1 projects
WT ,
SSHRC ,
NSERC ,
CIHR
Authors: Duggan, Ana T.; Klunk, Jennifer; Porter, Ashleigh F.; Dhody, Anna N.; +18 Authors
Duggan, Ana T.; Klunk, Jennifer; Porter, Ashleigh F.; Dhody, Anna N.; Hicks, Robert; Smith, Geoffrey L.; Humphreys, Margaret; McCollum, Andrea M.; Whitni B. Davidson; Wilkins, Kimberly; Li, Yu; Burke, Amanda; Polasky, Hanna; Flanders, Lowell; Poinar, Debi; Amogelang R. Raphenya; Lau, Tammy T. Y.; Alcock, Brian; McArthur, Andrew G.; G. Brian Golding; Holmes, Edward C.; Poinar, Hendrik N.;
doi: 10.6084/m9.figshare.12673911.v1 , 10.6084/m9.figshare.12673911
doi: 10.6084/m9.figshare.12673911.v1 , 10.6084/m9.figshare.12673911
Additional file 5: Table S3. Summary statistics produced by QUAST for SPAdes de novo assemblies of VK01, VK02 and VK08 from shotgun data.
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Dataset . 2020
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Additional file 14 of The origins and genomic diversity of American Civil War Era smallpox vaccine strains
Research datakeyboard_double_arrow_right Dataset 2020figshare WT, SSHRC, NSERC +1 projects
WT ,
SSHRC ,
NSERC ,
CIHR
Authors: Duggan, Ana T.; Klunk, Jennifer; Porter, Ashleigh F.; Dhody, Anna N.; +18 Authors
Duggan, Ana T.; Klunk, Jennifer; Porter, Ashleigh F.; Dhody, Anna N.; Hicks, Robert; Smith, Geoffrey L.; Humphreys, Margaret; McCollum, Andrea M.; Whitni B. Davidson; Wilkins, Kimberly; Li, Yu; Burke, Amanda; Polasky, Hanna; Flanders, Lowell; Poinar, Debi; Amogelang R. Raphenya; Lau, Tammy T. Y.; Alcock, Brian; McArthur, Andrew G.; G. Brian Golding; Holmes, Edward C.; Poinar, Hendrik N.;
doi: 10.6084/m9.figshare.12673887.v1 , 10.6084/m9.figshare.12673887
doi: 10.6084/m9.figshare.12673887.v1 , 10.6084/m9.figshare.12673887
Additional file 14: Table S6. BLASTX, Bowtie2, and taxonomic k-mer annotation of VK02 reads against CARD reference sequences.
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Dataset . 2020
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Additional file 9 of The origins and genomic diversity of American Civil War Era smallpox vaccine strains
Research datakeyboard_double_arrow_right Dataset 2020figshare NSERC, CIHR, SSHRC +1 projects
NSERC ,
CIHR ,
SSHRC ,
WT
Authors: Duggan, Ana T.; Klunk, Jennifer; Porter, Ashleigh F.; Dhody, Anna N.; +18 Authors
Duggan, Ana T.; Klunk, Jennifer; Porter, Ashleigh F.; Dhody, Anna N.; Hicks, Robert; Smith, Geoffrey L.; Humphreys, Margaret; McCollum, Andrea M.; Whitni B. Davidson;

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