5 Data sources

Canada
FR
BE

Fishbase
Data Repository Philippines, Canada, Greece, Sweden, Germany, European Union, China (People's Republic of), Belgium, France Not yet registered FishBase Information and Research Group, Incorporated, University of British Columbia, Fisheries Centre, Aristotle University of Thessaloniki, Swedish Museum of Natural History, IFM-GEOMAR +6 partners Life Sciences, Zoology, Systematics and Morphology
FishBase Information and Research Group, Incorporated,
University of British Columbia, Fisheries Centre,
Aristotle University of Thessaloniki,
Swedish Museum of Natural History,
IFM-GEOMAR,
WORLDFISH CENTER (ICLARM),
European Commission,
CAFS,
United Nations, Food and Agriculture Organization, Fisheries and Aquaculture Department,
RMCA,
MNHN
re3data: r3d100010912
re3data: r3d100010912
Website URL: https://www.fishbase.org/home.htm
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IMEx
Data Repository Italy, United Kingdom, United States, Canada, Singapore, European Union, France, India, Switzerland Not yet registered Universal Protein Resource, MINT, UCL-BHF, HPIDB, DIP +11 partners Life Sciences, Basic Biological and Medical Research, Cell Biology
Universal Protein Resource,
MINT,
UCL-BHF,
HPIDB,
DIP,
Biological General Repository for Interaction Datasets,
InnateDB,
I2D,
International Molecular Exchange Consortium,
MB Info,
EMBL-EBI,
MatrixDB,
Molecular connections,
European Commission, Research and Innovation,
SIB,
IntAct
re3data: r3d100010669
re3data: r3d100010669
Website URL: https://www.imexconsortium.org/
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Human Reference Protein Interactome Mapping Project
Data Repository Belgium, United States, Canada Not yet registered Jan Tavernier Lab, Center for Cancer Systems Biology, Boston, MA, USA, Roth Laboratory, Center of Cancer Systems Biology, United States, Bader Lab Life Science, Biology, Protein interaction
Jan Tavernier Lab,
Center for Cancer Systems Biology, Boston, MA, USA,
Roth Laboratory,
Center of Cancer Systems Biology, United States,
Bader Lab
doi: 10.25504/fairsharing.653ca1
doi: 10.25504/fairsharing.653ca1
Website URL: http://www.interactome-atlas.org/
The Human Reference Protein Interactome Mapping Project (HuRI) is a repository, created by the Center for Cancer Systems Biology (CCSB) at Dana-Farber Cancer Institute, which stores the data from the ongoing work on the first complete reference map of the human protein-protein interactome network. All pairwise combinations of human protein-coding genes are systematically being interrogated to identify which are involved in binary protein-protein interactions. HuRI has grown in several distinct stages primarily defined by the number of human protein-coding genes amenable to screening for which at least one Gateway-cloned Open Reading Frame (ORF) was available at the time of the project. Three proteome-scale human PPI datasets are available via HuRI. PPI datasets generated in systematic screens on smaller sets of our human ORF collection have also been included. Also included are all PPIs identified in screens using different protein isoforms from the same gene as generated by alternative splicing.
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Phenol-Explorer
Data Repository France, Canada, Spain Not yet registered INRA, ANSES, IARC, Danone (France), Nestlé +7 partners Life Sciences, Basic Biological and Medical Research, Biochemistry
INRA,
ANSES,
IARC,
Danone (France),
Nestlé,
INCA,
University of Alberta,
Danone,
UB,
Unilever,
Institut national de recherche pour l’agriculture, l’alimentation et l’environnement (INRAE),
Gouvernement.fr
re3data: r3d100012197
re3data: r3d100012197
Website URL: http://phenol-explorer.eu/
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City of Vancouver Open Data Portal
Data Repository France, Canada Not yet registered OPENDATASOFT, City of Vancouver Humanities and Social Sciences, Life Sciences, Natural Sciences
OPENDATASOFT,
City of Vancouver
re3data: r3d100013892
re3data: r3d100013892
Website URL: https://opendata.vancouver.ca/pages/home/
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5 Data sources

Fishbase
Data Repository Philippines, Canada, Greece, Sweden, Germany, European Union, China (People's Republic of), Belgium, France Not yet registered FishBase Information and Research Group, Incorporated, University of British Columbia, Fisheries Centre, Aristotle University of Thessaloniki, Swedish Museum of Natural History, IFM-GEOMAR +6 partners Life Sciences, Zoology, Systematics and Morphology
FishBase Information and Research Group, Incorporated,
University of British Columbia, Fisheries Centre,
Aristotle University of Thessaloniki,
Swedish Museum of Natural History,
IFM-GEOMAR,
WORLDFISH CENTER (ICLARM),
European Commission,
CAFS,
United Nations, Food and Agriculture Organization, Fisheries and Aquaculture Department,
RMCA,
MNHN
re3data: r3d100010912
re3data: r3d100010912
Website URL: https://www.fishbase.org/home.htm
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IMEx
Data Repository Italy, United Kingdom, United States, Canada, Singapore, European Union, France, India, Switzerland Not yet registered Universal Protein Resource, MINT, UCL-BHF, HPIDB, DIP +11 partners Life Sciences, Basic Biological and Medical Research, Cell Biology
Universal Protein Resource,
MINT,
UCL-BHF,
HPIDB,
DIP,
Biological General Repository for Interaction Datasets,
InnateDB,
I2D,
International Molecular Exchange Consortium,
MB Info,
EMBL-EBI,
MatrixDB,
Molecular connections,
European Commission, Research and Innovation,
SIB,
IntAct
re3data: r3d100010669
re3data: r3d100010669
Website URL: https://www.imexconsortium.org/
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Human Reference Protein Interactome Mapping Project
Data Repository Belgium, United States, Canada Not yet registered Jan Tavernier Lab, Center for Cancer Systems Biology, Boston, MA, USA, Roth Laboratory, Center of Cancer Systems Biology, United States, Bader Lab Life Science, Biology, Protein interaction
Jan Tavernier Lab,
Center for Cancer Systems Biology, Boston, MA, USA,
Roth Laboratory,
Center of Cancer Systems Biology, United States,
Bader Lab
doi: 10.25504/fairsharing.653ca1
doi: 10.25504/fairsharing.653ca1
Website URL: http://www.interactome-atlas.org/
The Human Reference Protein Interactome Mapping Project (HuRI) is a repository, created by the Center for Cancer Systems Biology (CCSB) at Dana-Farber Cancer Institute, which stores the data from the ongoing work on the first complete reference map of the human protein-protein interactome network. All pairwise combinations of human protein-coding genes are systematically being interrogated to identify which are involved in binary protein-protein interactions. HuRI has grown in several distinct stages primarily defined by the number of human protein-coding genes amenable to screening for which at least one Gateway-cloned Open Reading Frame (ORF) was available at the time of the project. Three proteome-scale human PPI datasets are available via HuRI. PPI datasets generated in systematic screens on smaller sets of our human ORF collection have also been included. Also included are all PPIs identified in screens using different protein isoforms from the same gene as generated by alternative splicing.
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Phenol-Explorer
Data Repository France, Canada, Spain Not yet registered INRA, ANSES, IARC, Danone (France), Nestlé +7 partners Life Sciences, Basic Biological and Medical Research, Biochemistry
INRA,
ANSES,
IARC,
Danone (France),
Nestlé,
INCA,
University of Alberta,
Danone,
UB,
Unilever,
Institut national de recherche pour l’agriculture, l’alimentation et l’environnement (INRAE),
Gouvernement.fr
re3data: r3d100012197
re3data: r3d100012197
Website URL: http://phenol-explorer.eu/
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City of Vancouver Open Data Portal
Data Repository France, Canada Not yet registered OPENDATASOFT, City of Vancouver Humanities and Social Sciences, Life Sciences, Natural Sciences
OPENDATASOFT,
City of Vancouver
re3data: r3d100013892
re3data: r3d100013892
Website URL: https://opendata.vancouver.ca/pages/home/
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Country (16)

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Canada
FR
BE

Fishbase

IMEx

Human Reference Protein Interactome Mapping Project

Phenol-Explorer

City of Vancouver Open Data Portal

Fishbase

IMEx

Human Reference Protein Interactome Mapping Project

Phenol-Explorer

City of Vancouver Open Data Portal

Filters

Type (1)

Compatibility Level (1)

Country (16)

Collected from (2)

Thematic (2)

Jurisdiction (1)

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Canada
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