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- software . 2020Open Access EnglishAuthors:Dvorak, Adam V.;Persistent IdentifiersPublisher: ZenodoProject: NSERC
Example code for the analysis pipeline used to create the structural template and quantitative myelin water imaging atlases for An atlas for human brain myelin content throughout the adult life span https://www.nature.com/articles/s41598-020-79540-3
- software . 2018EnglishAuthors:Sun, Ren X; Lalansingh, Christopher M.; Shadrielle Melijah G. Espiritu; Yao, Cindy Q.; Yamaguchi, Takafumi N.; Stephenie D. Prokopec; Szyca, Lesia; Houlahan, Kathleen E.; Heisler, Lawrence E.; Black, Morgan; ...Persistent IdentifiersPublisher: Code OceanProject: CIHR
S22S is a single-sample somatic SNV selector that employs a random forest model to predict whether a variant called without a matched normal sample is likely to be somatic or not. It integrates features from the VCF file, BAM file and population frequencies from publicl...
- software . 2019EnglishAuthors:Haibe-Kains, Benjamin; Bratman, Scott; Venkata Satya Manem;Persistent IdentifiersPublisher: Code OceanProject: CIHR
Radiotherapy is integral to the care of a majority of cancer patients. Despite differences in tumor responses to radiation (radioresponse), dose prescriptions are not currently tailored to individual patients. Recent large-scale cancer cell line databases hold the promi...
- software . 2018EnglishAuthors:Kaixuan Zhang; Yves-Alain Peter; Rochette, Martin;Persistent IdentifiersPublisher: Code OceanProject: NSERC
chalcogenide fiber Fabry-Perot filter with Gaussian beam propagation. Abstract: We demonstrate the first mid-infrared compatible all-fiber Fabry-Perot filter. It consists of chalcogenide fibers terminated with high-reflective coatings made of germanium and calcium fluor...
- software . 2019EnglishAuthors:Haibe-Kains, Benjamin; Tonekaboni, Seyed Ali Madani;Persistent IdentifiersPublisher: Code OceanProject: CIHR , NSERC
High-throughput molecular profiles of human cells have been used in predictive computational approaches for stratification of healthy and malignant phenotypes and identification of their biological states. In this regard, pathway activities have been used as biological ...
- software . 2020Open AccessAuthors:Timothy A. Sipkens;Persistent IdentifiersPublisher: ZenodoProject: NSERC
This release provides comprehensive updates to most of the program. This includes many feature updates, such as (1) formal support for the exponential distance method, (2) a reorganization of the program's packages and some function arguments to improve consistency acro...
- software . 2019EnglishAuthors:Kostoglou, Kyriaki; Robertson, Andrew; MacIntosh, Bradley; Mitsis, Georgios;Persistent IdentifiersPublisher: Code OceanProject: NSERC
This toolbox contains Matlab codes for time-varying multivariate autoregressive (TV-MVAR) modeling. MVAR models are usually applied to investigate couplings between various time-series in frequency domain. Herein, changes in the model parameters are tracked using the co...
- software . 2020Open AccessAuthors:Ghaith Arfaoui; Maroua Jaoua;Persistent IdentifiersPublisher: ZenodoProject: EC | EOSC-Life (824087), EC | PREP-IBISBA (871118), SSHRC , EC | IBISBA 1.0 (730976), EC | BioExcel-2 (823830), EC | SYNTHESYS PLUS (823827), EC | RELIANCE (101017501)
Initial release
- software . 2019EnglishAuthors:Koessler, Rebecca B.; Kohut, Taylor; Campbell, Lorne;Persistent IdentifiersPublisher: Code OceanProject: SSHRC
Ghosting, or avoiding technologically-mediated contact with a partner instead of providing an explanation for a breakup, has emerged as a relatively new breakup strategy in modern romantic relationships. The current study investigated differences in the process of relat...
- software . 2018EnglishAuthors:Zhaleh Safikhani; Smirnov, Petr;Persistent IdentifiersPublisher: Code OceanProject: CIHR
Next-generation sequencing technologies have recently been used in pharmacogenomic studies to characterize large panels of cancer cell lines at the genomic and transcriptomic levels. Among these technologies, RNA-sequencing enable profiling of alternatively spliced tran...