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53 research outcomes, page 1 of 6
  • software . 2020
    Open Access English
    Authors:
    Dvorak, Adam V.;
    Publisher: Zenodo
    Project: NSERC

    Example code for the analysis pipeline used to create the structural template and quantitative myelin water imaging atlases for An atlas for human brain myelin content throughout the adult life span https://www.nature.com/articles/s41598-020-79540-3

  • publication . Article . 2015
    Open Access
    Authors:
    Mathias Abegg; Dario Pianezzi; Jason J. S. Barton;
    Persistent Identifiers
    Project: SNSF | Timing Dependent Plastici... (320030_147023)

    Visual exploration of natural scenes imposes demands that differ between the upper and the lower visual hemifield. Yet little is known about how ocular motor performance is affected by the location of visual stimuli or the direction of a behavioural response. We compare...

  • publication . Article . 2009
    Open Access
    Authors:
    Donald C. Brien; Brian D. Corneil; Jillian H. Fecteau; Andrew H. Bell; Douglas P. Munoz;
    Persistent Identifiers
    Publisher: University of Bern

    Systematic modulations of microsaccades have been observed in humans during covert orienting. We show here that monkeys are a suitable model for studying the neurophysiology governing these modulations of microsaccades. Using various cue-target saccade tasks, we observe...

  • software . 2018
    English
    Authors:
    Sun, Ren X; Lalansingh, Christopher M.; Shadrielle Melijah G. Espiritu; Yao, Cindy Q.; Yamaguchi, Takafumi N.; Stephenie D. Prokopec; Szyca, Lesia; Houlahan, Kathleen E.; Heisler, Lawrence E.; Black, Morgan; ...
    Publisher: Code Ocean
    Project: CIHR

    S22S is a single-sample somatic SNV selector that employs a random forest model to predict whether a variant called without a matched normal sample is likely to be somatic or not. It integrates features from the VCF file, BAM file and population frequencies from publicl...

  • publication . Article . 2012
    Open Access English
    Authors:
    Valerie Higenell; Brian J. White; Joshua R. Hwang; Douglas P. Munoz;
    Persistent Identifiers
    Publisher: Internatioinal Group for Eye Movement Research (www.eyemovement.org)

    The capture of covert spatial attention by salient visual events influences subsequent gaze behavior. A task irrelevant stimulus (cue) can reduce (Attention capture) or prolong (Inhi-bition of return) saccade reaction time to a subsequent target stimulus depending on th...

  • publication . Article . Other literature type . 2010
    Open Access
    Authors:
    Mathias Abegg; Hyung Lee; Jason J.S. Barton;
    Publisher: University of Bern

    Studies of memory-guided saccades in monkeys show an upward bias, while studies of antisaccades in humans show a diagonal effect, a deviation of endpoints toward the 45° diagonal. To determine if these two different spatial biases are specific to different types of sacc...

  • software . 2019
    English
    Authors:
    Haibe-Kains, Benjamin; Bratman, Scott; Venkata Satya Manem;
    Persistent Identifiers
    Publisher: Code Ocean
    Project: CIHR

    Radiotherapy is integral to the care of a majority of cancer patients. Despite differences in tumor responses to radiation (radioresponse), dose prescriptions are not currently tailored to individual patients. Recent large-scale cancer cell line databases hold the promi...

  • software . 2018
    English
    Authors:
    Kaixuan Zhang; Yves-Alain Peter; Rochette, Martin;
    Publisher: Code Ocean
    Project: NSERC

    chalcogenide fiber Fabry-Perot filter with Gaussian beam propagation. Abstract: We demonstrate the first mid-infrared compatible all-fiber Fabry-Perot filter. It consists of chalcogenide fibers terminated with high-reflective coatings made of germanium and calcium fluor...

  • software . 2019
    English
    Authors:
    Haibe-Kains, Benjamin; Tonekaboni, Seyed Ali Madani;
    Persistent Identifiers
    Publisher: Code Ocean
    Project: CIHR , NSERC

    High-throughput molecular profiles of human cells have been used in predictive computational approaches for stratification of healthy and malignant phenotypes and identification of their biological states. In this regard, pathway activities have been used as biological ...

  • software . 2020
    Open Access
    Authors:
    Timothy A. Sipkens;
    Publisher: Zenodo
    Project: NSERC

    This release provides comprehensive updates to most of the program. This includes many feature updates, such as (1) formal support for the exponential distance method, (2) a reorganization of the program's packages and some function arguments to improve consistency acro...

53 research outcomes, page 1 of 6